STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESN65151.1Hypothetical protein; KEGG: kdgM, oligogalacturonate-specific porin. (237 aa)    
Predicted Functional Partners:
lptE
Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
   
 
 0.909
lptA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
  
 
 0.677
lptB
Fe(3+)-transporting ATPase; KEGG: ABC transporter.
  
 
 0.591
ESN65152.1
Hypothetical protein; KEGG: family 1 extracellular solute-binding protein.
       0.422
ESN63541.1
Hypothetical protein; KEGG: permease.
  
 
 0.410
ESN63542.1
KEGG: permease YjgP/YjgQ family protein.
  
 
 0.410
ESN65153.1
Glycerol-3-phosphate-transporting ATPase; KEGG: ABC transporter; Belongs to the ABC transporter superfamily.
       0.408
ESN65150.1
Hypothetical protein; KEGG: pectin acetylesterase.
  
    0.404
rlpA
Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.401
Your Current Organism:
Serratia sp. ATCC 39006
NCBI taxonomy Id: 104623
Other names: S. sp. ATCC 39006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.