STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESN62585.1Hypothetical protein; KEGG: transcriptional regulator with sigma factor-related N-terminal domain. (303 aa)    
Predicted Functional Partners:
ESN62586.1
Hypothetical protein; KEGG: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
 
     0.804
ESN62587.1
Hypothetical protein; KEGG: glucokinase.
 
     0.801
ESN63251.1
Hypothetical protein; KEGG: dhaK2, dihydroxyacetone kinase, phosphatase subunit.
 
  
  0.641
ESN63252.1
Glycerone kinase; KEGG: dhaK1, dihydroxyacetone kinase (glycerone kinase), kinase subunit.
 
  
  0.591
gpsA
Hypothetical protein; KEGG: glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.510
ESN63719.1
Hypothetical protein; KEGG: putative periplasmic solute-binding protein.
 
  
 0.490
lsrF
Hypothetical protein; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5- phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA; Belongs to the DeoC/FbaB aldolase family.
 
  
 0.461
srlE
Protein-N(pi)-phosphohistidine--sugar phosphotransferase; KEGG: PTS system glucitol/sorbitol-specific transporter subunit IIBC.
 
     0.418
ESN65409.1
Hypothetical protein; KEGG: acbL, cyclitol dehydrogenase.
 
     0.417
srlA
Hypothetical protein; KEGG: srlA, glucitol/sorbitol-specific enzyme IIC component of PTS.
 
     0.415
Your Current Organism:
Serratia sp. ATCC 39006
NCBI taxonomy Id: 104623
Other names: S. sp. ATCC 39006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.