STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001653055_00938Unannotated protein. (211 aa)    
Predicted Functional Partners:
trpE
Unannotated protein.
 
 0.993
trpC
Unannotated protein; Belongs to the TrpC family.
 
 
 0.966
trpA
Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
 
 0.964
trpB
Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 
 0.958
trpD
Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 
 0.905
trpG
Unannotated protein.
 
 
 0.879
GCA_001653055_00937
Unannotated protein.
       0.795
GCA_001653055_00936
Unannotated protein.
   
   0.661
GCA_001653055_00930
Unannotated protein.
       0.620
GCA_001653055_00931
Unannotated protein.
       0.620
Your Current Organism:
Helicobacter suis
NCBI taxonomy Id: 104628
Other names: Candidatus Helicobacter suis, DSM 19735, Gastrospirillum suis, H. suis, Helicobacter suis Baele et al. 2008, LMG 23995, LMG:23995
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.