STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNTW_00930Unannotated protein. (330 aa)    
Predicted Functional Partners:
dus
Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.822
SNTW_00950
Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.818
queC
Unannotated protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.647
SNTW_00900
Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
       0.511
exbD
Unannotated protein.
       0.511
exbB
Unannotated protein.
       0.511
SNTW_00970
Unannotated protein.
       0.490
SNTW_00980
Unannotated protein.
       0.485
Your Current Organism:
Helicobacter suis
NCBI taxonomy Id: 104628
Other names: Candidatus Helicobacter suis, DSM 19735, Gastrospirillum suis, H. suis, Helicobacter suis Baele et al. 2008, LMG 23995, LMG:23995
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.