Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BZARG_1102 | BZARG_1437 | Hypothetical protein. | Hypothetical protein. | 0.464 |
BZARG_1102 | BZARG_1651 | Hypothetical protein. | Putative membrane protein. | 0.633 |
BZARG_1102 | BZARG_1950 | Hypothetical protein. | Hypothetical protein. | 0.757 |
BZARG_1102 | BZARG_2103 | Hypothetical protein. | lysM domain protein. | 0.677 |
BZARG_1102 | BZARG_287 | Hypothetical protein. | Hypothetical protein. | 0.747 |
BZARG_1102 | BZARG_2992 | Hypothetical protein. | Ribonuclease Z. | 0.734 |
BZARG_1102 | BZARG_3026 | Hypothetical protein. | Hypothetical protein. | 0.637 |
BZARG_1102 | BZARG_55 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase. | 0.595 |
BZARG_1102 | BZARG_550 | Hypothetical protein. | Putative membrane protein. | 0.647 |
BZARG_1437 | BZARG_1102 | Hypothetical protein. | Hypothetical protein. | 0.464 |
BZARG_1437 | BZARG_1651 | Hypothetical protein. | Putative membrane protein. | 0.715 |
BZARG_1437 | BZARG_1950 | Hypothetical protein. | Hypothetical protein. | 0.645 |
BZARG_1437 | BZARG_2103 | Hypothetical protein. | lysM domain protein. | 0.676 |
BZARG_1437 | BZARG_287 | Hypothetical protein. | Hypothetical protein. | 0.758 |
BZARG_1437 | BZARG_2992 | Hypothetical protein. | Ribonuclease Z. | 0.733 |
BZARG_1437 | BZARG_3026 | Hypothetical protein. | Hypothetical protein. | 0.674 |
BZARG_1437 | BZARG_55 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase. | 0.724 |
BZARG_1437 | BZARG_550 | Hypothetical protein. | Putative membrane protein. | 0.638 |
BZARG_1651 | BZARG_1102 | Putative membrane protein. | Hypothetical protein. | 0.633 |
BZARG_1651 | BZARG_1437 | Putative membrane protein. | Hypothetical protein. | 0.715 |
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