STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BZARG_723UPF0337 protein yjbJ; Belongs to the UPF0337 (CsbD) family. (61 aa)    
Predicted Functional Partners:
BZARG_731
Pyridoxamine 5'-phosphate oxidase family protein.
  
    0.679
BZARG_721
Hypothetical protein.
  
    0.667
BZARG_2781
Putative membrane protein.
  
    0.644
BZARG_1961
Hypothetical protein.
   
    0.641
BZARG_2398
NAD dependent epimerase/dehydratase family protein.
   
    0.605
BZARG_597
ABC-2 type transporter family protein.
  
    0.603
BZARG_600
ABC transporter family protein.
  
    0.602
BZARG_112
SLBB domain protein.
   
    0.599
BZARG_1460
Hypothetical protein.
   
    0.599
BZARG_2077
Polysaccharide biosynthesis/export family protein.
   
    0.599
Your Current Organism:
Bizionia argentinensis
NCBI taxonomy Id: 1046627
Other names: B. argentinensis JUB59, Bizionia argentinensis JUB59, Bizionia argentinensis str. JUB59, Bizionia argentinensis strain JUB59
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