Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE88978.1 | SDE90225.1 | SAMN04488121_10173 | SAMN04488121_101114 | Hypothetical protein. | Molecular chaperone HtpG. | 0.994 |
SDE88978.1 | SDE93974.1 | SAMN04488121_10173 | SAMN04488121_101251 | Hypothetical protein. | Leucine-rich repeat (LRR) protein. | 0.875 |
SDE88978.1 | SDF13610.1 | SAMN04488121_10173 | SAMN04488121_101901 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B). | 0.483 |
SDE88978.1 | SDF59996.1 | SAMN04488121_10173 | SAMN04488121_102389 | Hypothetical protein. | Hypothetical protein. | 0.891 |
SDE88978.1 | SDF70337.1 | SAMN04488121_10173 | SAMN04488121_102705 | Hypothetical protein. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.420 |
SDE88978.1 | SDF73253.1 | SAMN04488121_10173 | SAMN04488121_102801 | Hypothetical protein. | Curved DNA-binding protein. | 0.891 |
SDE88978.1 | SDH03015.1 | SAMN04488121_10173 | SAMN04488121_108107 | Hypothetical protein. | Hypothetical protein. | 0.915 |
SDE88978.1 | SDH32252.1 | SAMN04488121_10173 | SAMN04488121_11136 | Hypothetical protein. | Molecular chaperone DnaK. | 0.915 |
SDE88978.1 | dnaJ | SAMN04488121_10173 | SAMN04488121_10123 | Hypothetical protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.891 |
SDE88978.1 | dnaK | SAMN04488121_10173 | SAMN04488121_103360 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.915 |
SDE90225.1 | SDE88978.1 | SAMN04488121_101114 | SAMN04488121_10173 | Molecular chaperone HtpG. | Hypothetical protein. | 0.994 |
SDE90225.1 | SDE93974.1 | SAMN04488121_101114 | SAMN04488121_101251 | Molecular chaperone HtpG. | Leucine-rich repeat (LRR) protein. | 0.984 |
SDE90225.1 | SDF13610.1 | SAMN04488121_101114 | SAMN04488121_101901 | Molecular chaperone HtpG. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B). | 0.994 |
SDE90225.1 | SDF59996.1 | SAMN04488121_101114 | SAMN04488121_102389 | Molecular chaperone HtpG. | Hypothetical protein. | 0.994 |
SDE90225.1 | SDF70337.1 | SAMN04488121_101114 | SAMN04488121_102705 | Molecular chaperone HtpG. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.987 |
SDE90225.1 | SDF73253.1 | SAMN04488121_101114 | SAMN04488121_102801 | Molecular chaperone HtpG. | Curved DNA-binding protein. | 0.994 |
SDE90225.1 | SDH03015.1 | SAMN04488121_101114 | SAMN04488121_108107 | Molecular chaperone HtpG. | Hypothetical protein. | 0.998 |
SDE90225.1 | SDH32252.1 | SAMN04488121_101114 | SAMN04488121_11136 | Molecular chaperone HtpG. | Molecular chaperone DnaK. | 0.998 |
SDE90225.1 | dnaJ | SAMN04488121_101114 | SAMN04488121_10123 | Molecular chaperone HtpG. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.994 |
SDE90225.1 | dnaK | SAMN04488121_101114 | SAMN04488121_103360 | Molecular chaperone HtpG. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.998 |
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