STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF22308.13-hydroxybutyryl-CoA dehydrogenase. (286 aa)    
Predicted Functional Partners:
SDG06536.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.994
SDF08175.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.993
SDH25131.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.992
SDG42003.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.979
SDF19104.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 0.978
SDE93516.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.977
SDG50066.1
3-hydroxybutyryl-CoA dehydrogenase.
  
  
  0.951
SDG75064.1
methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.922
SDH12411.1
Acyl-CoA dehydrogenase.
 0.890
SDE89381.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.881
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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