Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF12580.1 | SDF23594.1 | SAMN04488121_101869 | SAMN04488121_1011217 | Hypothetical protein. | Family of unknown function. | 0.508 |
SDF16977.1 | SDF23594.1 | SAMN04488121_1011005 | SAMN04488121_1011217 | Hypothetical protein. | Family of unknown function. | 0.503 |
SDF16977.1 | SDF23622.1 | SAMN04488121_1011005 | SAMN04488121_1011218 | Hypothetical protein. | Surface antigen. | 0.621 |
SDF16977.1 | SDG74856.1 | SAMN04488121_1011005 | SAMN04488121_106138 | Hypothetical protein. | Outer membrane protein assembly factor BamA. | 0.646 |
SDF23594.1 | SDF12580.1 | SAMN04488121_1011217 | SAMN04488121_101869 | Family of unknown function. | Hypothetical protein. | 0.508 |
SDF23594.1 | SDF16977.1 | SAMN04488121_1011217 | SAMN04488121_1011005 | Family of unknown function. | Hypothetical protein. | 0.503 |
SDF23594.1 | SDF23622.1 | SAMN04488121_1011217 | SAMN04488121_1011218 | Family of unknown function. | Surface antigen. | 0.950 |
SDF23594.1 | SDF55501.1 | SAMN04488121_1011217 | SAMN04488121_102256 | Family of unknown function. | AsmA protein. | 0.554 |
SDF23594.1 | SDF97648.1 | SAMN04488121_1011217 | SAMN04488121_10352 | Family of unknown function. | Hypothetical protein. | 0.447 |
SDF23594.1 | SDG36441.1 | SAMN04488121_1011217 | SAMN04488121_1048 | Family of unknown function. | Hypothetical protein. | 0.444 |
SDF23594.1 | SDG74856.1 | SAMN04488121_1011217 | SAMN04488121_106138 | Family of unknown function. | Outer membrane protein assembly factor BamA. | 0.770 |
SDF23594.1 | SDG76585.1 | SAMN04488121_1011217 | SAMN04488121_106202 | Family of unknown function. | Outer membrane protein beta-barrel domain-containing protein. | 0.477 |
SDF23594.1 | SDH07713.1 | SAMN04488121_1011217 | SAMN04488121_108258 | Family of unknown function. | Hypothetical protein. | 0.816 |
SDF23594.1 | rlpA | SAMN04488121_1011217 | SAMN04488121_1011219 | Family of unknown function. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.618 |
SDF23622.1 | SDF16977.1 | SAMN04488121_1011218 | SAMN04488121_1011005 | Surface antigen. | Hypothetical protein. | 0.621 |
SDF23622.1 | SDF23594.1 | SAMN04488121_1011218 | SAMN04488121_1011217 | Surface antigen. | Family of unknown function. | 0.950 |
SDF23622.1 | SDF55501.1 | SAMN04488121_1011218 | SAMN04488121_102256 | Surface antigen. | AsmA protein. | 0.421 |
SDF23622.1 | rlpA | SAMN04488121_1011218 | SAMN04488121_1011219 | Surface antigen. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.621 |
SDF55501.1 | SDF23594.1 | SAMN04488121_102256 | SAMN04488121_1011217 | AsmA protein. | Family of unknown function. | 0.554 |
SDF55501.1 | SDF23622.1 | SAMN04488121_102256 | SAMN04488121_1011218 | AsmA protein. | Surface antigen. | 0.421 |
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