Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE92848.1 | SDF69433.1 | SAMN04488121_101203 | SAMN04488121_102678 | His Kinase A (phospho-acceptor) domain-containing protein. | Signal transduction histidine kinase. | 0.998 |
SDE92848.1 | SDG27239.1 | SAMN04488121_101203 | SAMN04488121_1031039 | His Kinase A (phospho-acceptor) domain-containing protein. | PAS domain S-box-containing protein. | 0.997 |
SDE92848.1 | SDG77980.1 | SAMN04488121_101203 | SAMN04488121_106258 | His Kinase A (phospho-acceptor) domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.995 |
SDE92848.1 | SDG78003.1 | SAMN04488121_101203 | SAMN04488121_106259 | His Kinase A (phospho-acceptor) domain-containing protein. | CheR methyltransferase, all-alpha domain. | 0.998 |
SDE92848.1 | SDG90815.1 | SAMN04488121_101203 | SAMN04488121_107182 | His Kinase A (phospho-acceptor) domain-containing protein. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.996 |
SDE92848.1 | SDH00489.1 | SAMN04488121_101203 | SAMN04488121_10822 | His Kinase A (phospho-acceptor) domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.995 |
SDE92848.1 | SDH03990.1 | SAMN04488121_101203 | SAMN04488121_108139 | His Kinase A (phospho-acceptor) domain-containing protein. | Signal transduction histidine kinase. | 0.997 |
SDE92848.1 | SDH24902.1 | SAMN04488121_101203 | SAMN04488121_1104 | His Kinase A (phospho-acceptor) domain-containing protein. | PAS fold-containing protein. | 0.997 |
SDE92848.1 | SDH27525.1 | SAMN04488121_101203 | SAMN04488121_11096 | His Kinase A (phospho-acceptor) domain-containing protein. | CheB methylesterase. | 0.995 |
SDE92848.1 | SDH43495.1 | SAMN04488121_101203 | SAMN04488121_112105 | His Kinase A (phospho-acceptor) domain-containing protein. | PAS domain S-box-containing protein. | 0.998 |
SDF69433.1 | SDE92848.1 | SAMN04488121_102678 | SAMN04488121_101203 | Signal transduction histidine kinase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.998 |
SDF69433.1 | SDG27239.1 | SAMN04488121_102678 | SAMN04488121_1031039 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDF69433.1 | SDG77980.1 | SAMN04488121_102678 | SAMN04488121_106258 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SDF69433.1 | SDG78003.1 | SAMN04488121_102678 | SAMN04488121_106259 | Signal transduction histidine kinase. | CheR methyltransferase, all-alpha domain. | 0.999 |
SDF69433.1 | SDG90815.1 | SAMN04488121_102678 | SAMN04488121_107182 | Signal transduction histidine kinase. | ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.999 |
SDF69433.1 | SDH00489.1 | SAMN04488121_102678 | SAMN04488121_10822 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SDF69433.1 | SDH03990.1 | SAMN04488121_102678 | SAMN04488121_108139 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDF69433.1 | SDH24902.1 | SAMN04488121_102678 | SAMN04488121_1104 | Signal transduction histidine kinase. | PAS fold-containing protein. | 0.999 |
SDF69433.1 | SDH27525.1 | SAMN04488121_102678 | SAMN04488121_11096 | Signal transduction histidine kinase. | CheB methylesterase. | 0.999 |
SDF69433.1 | SDH43495.1 | SAMN04488121_102678 | SAMN04488121_112105 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
page 1 of 6