Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE93974.1 | SDE97792.1 | SAMN04488121_101251 | SAMN04488121_101397 | Leucine-rich repeat (LRR) protein. | SusD family protein. | 0.729 |
SDE93974.1 | atpE | SAMN04488121_101251 | SAMN04488121_104174 | Leucine-rich repeat (LRR) protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.903 |
SDE96409.1 | SDE97792.1 | SAMN04488121_101343 | SAMN04488121_101397 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.699 |
SDE97764.1 | SDE97792.1 | SAMN04488121_101396 | SAMN04488121_101397 | Hypothetical protein. | SusD family protein. | 0.773 |
SDE97764.1 | SDE97823.1 | SAMN04488121_101396 | SAMN04488121_101398 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.761 |
SDE97792.1 | SDE93974.1 | SAMN04488121_101397 | SAMN04488121_101251 | SusD family protein. | Leucine-rich repeat (LRR) protein. | 0.729 |
SDE97792.1 | SDE96409.1 | SAMN04488121_101397 | SAMN04488121_101343 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.699 |
SDE97792.1 | SDE97764.1 | SAMN04488121_101397 | SAMN04488121_101396 | SusD family protein. | Hypothetical protein. | 0.773 |
SDE97792.1 | SDE97823.1 | SAMN04488121_101397 | SAMN04488121_101398 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.935 |
SDE97792.1 | SDF57400.1 | SAMN04488121_101397 | SAMN04488121_102309 | SusD family protein. | Iron complex outermembrane recepter protein. | 0.650 |
SDE97792.1 | SDG60472.1 | SAMN04488121_101397 | SAMN04488121_105165 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.718 |
SDE97792.1 | SDG61434.1 | SAMN04488121_101397 | SAMN04488121_105198 | SusD family protein. | Iron complex outermembrane recepter protein. | 0.686 |
SDE97792.1 | SDH17015.1 | SAMN04488121_101397 | SAMN04488121_109155 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.637 |
SDE97792.1 | SDH44458.1 | SAMN04488121_101397 | SAMN04488121_112133 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.627 |
SDE97792.1 | atpE | SAMN04488121_101397 | SAMN04488121_104174 | SusD family protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.983 |
SDE97823.1 | SDE97764.1 | SAMN04488121_101398 | SAMN04488121_101396 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.761 |
SDE97823.1 | SDE97792.1 | SAMN04488121_101398 | SAMN04488121_101397 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.935 |
SDF57400.1 | SDE97792.1 | SAMN04488121_102309 | SAMN04488121_101397 | Iron complex outermembrane recepter protein. | SusD family protein. | 0.650 |
SDG60472.1 | SDE97792.1 | SAMN04488121_105165 | SAMN04488121_101397 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.718 |
SDG61434.1 | SDE97792.1 | SAMN04488121_105198 | SAMN04488121_101397 | Iron complex outermembrane recepter protein. | SusD family protein. | 0.686 |
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