STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF04217.1Hypothetical protein. (346 aa)    
Predicted Functional Partners:
SDF55706.1
Acyl transferase domain-containing protein.
   
 
 0.920
SDE88509.1
Protein of unknown function.
    
 0.830
SDG42094.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.774
SDG94194.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 0.774
SDF69638.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
   
 0.763
SDH13325.1
Dihydrolipoamide dehydrogenase.
   
 0.763
SDF99156.1
Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.722
SDF24541.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.713
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 0.675
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 0.675
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.