Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF07609.1 | SDF07644.1 | SAMN04488121_101717 | SAMN04488121_101718 | Hypothetical protein. | Hypothetical protein. | 0.548 |
SDF07609.1 | SDF07694.1 | SAMN04488121_101717 | SAMN04488121_101719 | Hypothetical protein. | YceI-like domain-containing protein. | 0.501 |
SDF07609.1 | SDF07733.1 | SAMN04488121_101717 | SAMN04488121_101720 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SDF07644.1 | SDF07609.1 | SAMN04488121_101718 | SAMN04488121_101717 | Hypothetical protein. | Hypothetical protein. | 0.548 |
SDF07644.1 | SDF07694.1 | SAMN04488121_101718 | SAMN04488121_101719 | Hypothetical protein. | YceI-like domain-containing protein. | 0.935 |
SDF07644.1 | SDF07733.1 | SAMN04488121_101718 | SAMN04488121_101720 | Hypothetical protein. | Hypothetical protein. | 0.627 |
SDF07644.1 | murF | SAMN04488121_101718 | SAMN04488121_101721 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.431 |
SDF07694.1 | SDF07609.1 | SAMN04488121_101719 | SAMN04488121_101717 | YceI-like domain-containing protein. | Hypothetical protein. | 0.501 |
SDF07694.1 | SDF07644.1 | SAMN04488121_101719 | SAMN04488121_101718 | YceI-like domain-containing protein. | Hypothetical protein. | 0.935 |
SDF07694.1 | SDF07733.1 | SAMN04488121_101719 | SAMN04488121_101720 | YceI-like domain-containing protein. | Hypothetical protein. | 0.689 |
SDF07694.1 | murF | SAMN04488121_101719 | SAMN04488121_101721 | YceI-like domain-containing protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.468 |
SDF07733.1 | SDF07609.1 | SAMN04488121_101720 | SAMN04488121_101717 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SDF07733.1 | SDF07644.1 | SAMN04488121_101720 | SAMN04488121_101718 | Hypothetical protein. | Hypothetical protein. | 0.627 |
SDF07733.1 | SDF07694.1 | SAMN04488121_101720 | SAMN04488121_101719 | Hypothetical protein. | YceI-like domain-containing protein. | 0.689 |
SDF07733.1 | murF | SAMN04488121_101720 | SAMN04488121_101721 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.519 |
murF | SDF07644.1 | SAMN04488121_101721 | SAMN04488121_101718 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | Hypothetical protein. | 0.431 |
murF | SDF07694.1 | SAMN04488121_101721 | SAMN04488121_101719 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | YceI-like domain-containing protein. | 0.468 |
murF | SDF07733.1 | SAMN04488121_101721 | SAMN04488121_101720 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | Hypothetical protein. | 0.519 |