Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE89046.1 | SDE89076.1 | SAMN04488121_10175 | SAMN04488121_10176 | NUDIX domain-containing protein. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.623 |
SDE89046.1 | SDF14921.1 | SAMN04488121_10175 | SAMN04488121_101942 | NUDIX domain-containing protein. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.735 |
SDE89046.1 | SDF19544.1 | SAMN04488121_10175 | SAMN04488121_1011091 | NUDIX domain-containing protein. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.685 |
SDE89046.1 | SDF69433.1 | SAMN04488121_10175 | SAMN04488121_102678 | NUDIX domain-containing protein. | Signal transduction histidine kinase. | 0.618 |
SDE89046.1 | SDG08203.1 | SAMN04488121_10175 | SAMN04488121_103405 | NUDIX domain-containing protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.642 |
SDE89046.1 | SDH43495.1 | SAMN04488121_10175 | SAMN04488121_112105 | NUDIX domain-containing protein. | PAS domain S-box-containing protein. | 0.618 |
SDE89046.1 | SDH48246.1 | SAMN04488121_10175 | SAMN04488121_11320 | NUDIX domain-containing protein. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.695 |
SDE89046.1 | nadA | SAMN04488121_10175 | SAMN04488121_1011225 | NUDIX domain-containing protein. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.640 |
SDE89046.1 | nadE | SAMN04488121_10175 | SAMN04488121_101710 | NUDIX domain-containing protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.714 |
SDE89046.1 | ribBA | SAMN04488121_10175 | SAMN04488121_103963 | NUDIX domain-containing protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.624 |
SDE89076.1 | SDE89046.1 | SAMN04488121_10176 | SAMN04488121_10175 | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | NUDIX domain-containing protein. | 0.623 |
SDF14921.1 | SDE89046.1 | SAMN04488121_101942 | SAMN04488121_10175 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | NUDIX domain-containing protein. | 0.735 |
SDF14921.1 | SDF19544.1 | SAMN04488121_101942 | SAMN04488121_1011091 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.917 |
SDF14921.1 | SDG08203.1 | SAMN04488121_101942 | SAMN04488121_103405 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.922 |
SDF14921.1 | SDH48246.1 | SAMN04488121_101942 | SAMN04488121_11320 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.861 |
SDF14921.1 | nadA | SAMN04488121_101942 | SAMN04488121_1011225 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
SDF14921.1 | nadE | SAMN04488121_101942 | SAMN04488121_101710 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.609 |
SDF19544.1 | SDE89046.1 | SAMN04488121_1011091 | SAMN04488121_10175 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NUDIX domain-containing protein. | 0.685 |
SDF19544.1 | SDF14921.1 | SAMN04488121_1011091 | SAMN04488121_101942 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.917 |
SDF19544.1 | SDF69433.1 | SAMN04488121_1011091 | SAMN04488121_102678 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Signal transduction histidine kinase. | 0.805 |
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