Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE89532.1 | SDF08970.1 | SAMN04488121_10192 | SAMN04488121_101755 | RNA polymerase Rpb6. | Hypothetical protein. | 0.416 |
SDE89532.1 | SDF09039.1 | SAMN04488121_10192 | SAMN04488121_101757 | RNA polymerase Rpb6. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.426 |
SDE89532.1 | rpoA | SAMN04488121_10192 | SAMN04488121_106170 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SDE89532.1 | rpoB | SAMN04488121_10192 | SAMN04488121_10695 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SDE89532.1 | rpoC | SAMN04488121_10192 | SAMN04488121_10694 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
SDF08970.1 | SDE89532.1 | SAMN04488121_101755 | SAMN04488121_10192 | Hypothetical protein. | RNA polymerase Rpb6. | 0.416 |
SDF08970.1 | SDF09005.1 | SAMN04488121_101755 | SAMN04488121_101756 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDF08970.1 | SDF09039.1 | SAMN04488121_101755 | SAMN04488121_101757 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.445 |
SDF08970.1 | SDF96893.1 | SAMN04488121_101755 | SAMN04488121_10325 | Hypothetical protein. | Anti-sigma-K factor RskA. | 0.435 |
SDF08970.1 | SDF96949.1 | SAMN04488121_101755 | SAMN04488121_10327 | Hypothetical protein. | Anti-sigma-K factor RskA. | 0.435 |
SDF08970.1 | SDG15225.1 | SAMN04488121_101755 | SAMN04488121_103647 | Hypothetical protein. | ChrR Cupin-like domain-containing protein. | 0.414 |
SDF08970.1 | SDH60002.1 | SAMN04488121_101755 | SAMN04488121_11579 | Hypothetical protein. | Protein of unknown function. | 0.435 |
SDF08970.1 | rpoA | SAMN04488121_101755 | SAMN04488121_106170 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.416 |
SDF08970.1 | rpoB | SAMN04488121_101755 | SAMN04488121_10695 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.424 |
SDF08970.1 | rpoC | SAMN04488121_101755 | SAMN04488121_10694 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.424 |
SDF09005.1 | SDF08970.1 | SAMN04488121_101756 | SAMN04488121_101755 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDF09005.1 | SDF09039.1 | SAMN04488121_101756 | SAMN04488121_101757 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.445 |
SDF09039.1 | SDE89532.1 | SAMN04488121_101757 | SAMN04488121_10192 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | RNA polymerase Rpb6. | 0.426 |
SDF09039.1 | SDF08970.1 | SAMN04488121_101757 | SAMN04488121_101755 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.445 |
SDF09039.1 | SDF09005.1 | SAMN04488121_101757 | SAMN04488121_101756 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.445 |
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