STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF16368.1Protein SCO1/2. (228 aa)    
Predicted Functional Partners:
SDF16574.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.990
SDF16330.1
Putative membrane protein.
 
  
 0.874
SDF16433.1
Cytochrome c oxidase subunit 3.
 
  
 0.803
SDF16536.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.793
SDF16468.1
Cytochrome c oxidase subunit 3.
 
  
 0.790
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.757
SDG26628.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.660
SDF14174.1
Peroxiredoxin.
  
 
 0.655
SDF46622.1
Peroxiredoxin.
  
 
 0.653
SDF26791.1
Cytochrome c oxidase assembly protein subunit 15.
 
 
 0.649
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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