Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF71836.1 | SDF79920.1 | SAMN04488121_102755 | SAMN04488121_1021022 | Glyoxalase family protein. | 4-oxalocrotonate tautomerase. | 0.859 |
SDF71836.1 | SDF79939.1 | SAMN04488121_102755 | SAMN04488121_1021023 | Glyoxalase family protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.450 |
SDF71836.1 | SDF79988.1 | SAMN04488121_102755 | SAMN04488121_1021024 | Glyoxalase family protein. | Putative lumazine-binding. | 0.593 |
SDF71836.1 | SDG10241.1 | SAMN04488121_102755 | SAMN04488121_103469 | Glyoxalase family protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.683 |
SDF79840.1 | SDF79884.1 | SAMN04488121_1021020 | SAMN04488121_1021021 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.641 |
SDF79840.1 | SDF79920.1 | SAMN04488121_1021020 | SAMN04488121_1021022 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 4-oxalocrotonate tautomerase. | 0.436 |
SDF79840.1 | SDF79939.1 | SAMN04488121_1021020 | SAMN04488121_1021023 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.521 |
SDF79840.1 | SDF79988.1 | SAMN04488121_1021020 | SAMN04488121_1021024 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Putative lumazine-binding. | 0.643 |
SDF79840.1 | SDF80021.1 | SAMN04488121_1021020 | SAMN04488121_1021025 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nitronate monooxygenase. | 0.430 |
SDF79884.1 | SDF79840.1 | SAMN04488121_1021021 | SAMN04488121_1021020 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.641 |
SDF79884.1 | SDF79920.1 | SAMN04488121_1021021 | SAMN04488121_1021022 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 4-oxalocrotonate tautomerase. | 0.678 |
SDF79884.1 | SDF79939.1 | SAMN04488121_1021021 | SAMN04488121_1021023 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.719 |
SDF79884.1 | SDF79988.1 | SAMN04488121_1021021 | SAMN04488121_1021024 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Putative lumazine-binding. | 0.779 |
SDF79884.1 | SDF80021.1 | SAMN04488121_1021021 | SAMN04488121_1021025 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Nitronate monooxygenase. | 0.655 |
SDF79920.1 | SDF71836.1 | SAMN04488121_1021022 | SAMN04488121_102755 | 4-oxalocrotonate tautomerase. | Glyoxalase family protein. | 0.859 |
SDF79920.1 | SDF79840.1 | SAMN04488121_1021022 | SAMN04488121_1021020 | 4-oxalocrotonate tautomerase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.436 |
SDF79920.1 | SDF79884.1 | SAMN04488121_1021022 | SAMN04488121_1021021 | 4-oxalocrotonate tautomerase. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.678 |
SDF79920.1 | SDF79939.1 | SAMN04488121_1021022 | SAMN04488121_1021023 | 4-oxalocrotonate tautomerase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.848 |
SDF79920.1 | SDF79988.1 | SAMN04488121_1021022 | SAMN04488121_1021024 | 4-oxalocrotonate tautomerase. | Putative lumazine-binding. | 0.932 |
SDF79920.1 | SDF80021.1 | SAMN04488121_1021022 | SAMN04488121_1021025 | 4-oxalocrotonate tautomerase. | Nitronate monooxygenase. | 0.769 |
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