Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF11791.1 | SDF50442.1 | SAMN04488121_101845 | SAMN04488121_102116 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Amidohydrolase. | 0.710 |
SDF11791.1 | SDF55706.1 | SAMN04488121_101845 | SAMN04488121_102262 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Acyl transferase domain-containing protein. | 0.994 |
SDF11791.1 | SDF55971.1 | SAMN04488121_101845 | SAMN04488121_102270 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | HxxPF-repeated domain-containing protein. | 0.430 |
SDF11791.1 | SDF65644.1 | SAMN04488121_101845 | SAMN04488121_102569 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Predicted dehydrogenase. | 0.918 |
SDF11791.1 | SDF71836.1 | SAMN04488121_101845 | SAMN04488121_102755 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glyoxalase family protein. | 0.841 |
SDF11791.1 | SDF99750.1 | SAMN04488121_101845 | SAMN04488121_103116 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-fuconolactonase. | 0.827 |
SDF11791.1 | gcvT | SAMN04488121_101845 | SAMN04488121_1011085 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.854 |
SDF50442.1 | SDF11791.1 | SAMN04488121_102116 | SAMN04488121_101845 | Amidohydrolase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.710 |
SDF50442.1 | SDF55706.1 | SAMN04488121_102116 | SAMN04488121_102262 | Amidohydrolase. | Acyl transferase domain-containing protein. | 0.531 |
SDF50442.1 | SDF55971.1 | SAMN04488121_102116 | SAMN04488121_102270 | Amidohydrolase. | HxxPF-repeated domain-containing protein. | 0.439 |
SDF50442.1 | SDF65644.1 | SAMN04488121_102116 | SAMN04488121_102569 | Amidohydrolase. | Predicted dehydrogenase. | 0.449 |
SDF50442.1 | SDF71836.1 | SAMN04488121_102116 | SAMN04488121_102755 | Amidohydrolase. | Glyoxalase family protein. | 0.747 |
SDF50442.1 | SDF99750.1 | SAMN04488121_102116 | SAMN04488121_103116 | Amidohydrolase. | L-fuconolactonase. | 0.537 |
SDF50442.1 | SDG06135.1 | SAMN04488121_102116 | SAMN04488121_103332 | Amidohydrolase. | Regulator of RNase E activity RraA. | 0.538 |
SDF50442.1 | SDG09248.1 | SAMN04488121_102116 | SAMN04488121_103437 | Amidohydrolase. | Mannose-6-phosphate isomerase, type 2. | 0.418 |
SDF50442.1 | SDG20727.1 | SAMN04488121_102116 | SAMN04488121_103820 | Amidohydrolase. | Cupin domain-containing protein. | 0.414 |
SDF50442.1 | gcvT | SAMN04488121_102116 | SAMN04488121_1011085 | Amidohydrolase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.439 |
SDF55706.1 | SDF11791.1 | SAMN04488121_102262 | SAMN04488121_101845 | Acyl transferase domain-containing protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.994 |
SDF55706.1 | SDF50442.1 | SAMN04488121_102262 | SAMN04488121_102116 | Acyl transferase domain-containing protein. | Amidohydrolase. | 0.531 |
SDF55706.1 | SDF55971.1 | SAMN04488121_102262 | SAMN04488121_102270 | Acyl transferase domain-containing protein. | HxxPF-repeated domain-containing protein. | 0.999 |
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