STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF50629.1FtsX-like permease family protein. (784 aa)    
Predicted Functional Partners:
SDG49666.1
Putative ABC transport system ATP-binding protein.
 
 
 0.823
SDG49736.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.786
SDG49793.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.770
SDG49534.1
ABC-type lipoprotein export system, ATPase component.
 
 
 0.736
SDG49767.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
     0.494
SDF50596.1
Dehydrogenase (flavoprotein).
       0.476
SDF50526.1
Hypothetical protein.
       0.454
SDF50558.1
Uncharacterized protein.
       0.454
SDF75592.1
Putative ABC transport system permease protein.
 
 
 
0.441
SDF63463.1
MacB-like core domain-containing protein.
  
    0.421
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.