Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDF23468.1 | SDF29566.1 | SAMN04488121_1011213 | SAMN04488121_1011402 | Glutamate synthase (NADH) large subunit. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.724 |
| SDF23468.1 | SDF47755.1 | SAMN04488121_1011213 | SAMN04488121_10233 | Glutamate synthase (NADH) large subunit. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.873 |
| SDF23468.1 | SDF55706.1 | SAMN04488121_1011213 | SAMN04488121_102262 | Glutamate synthase (NADH) large subunit. | Acyl transferase domain-containing protein. | 0.957 |
| SDF23468.1 | SDF56003.1 | SAMN04488121_1011213 | SAMN04488121_102271 | Glutamate synthase (NADH) large subunit. | Phosphopantetheine attachment site. | 0.933 |
| SDF23468.1 | SDG41922.1 | SAMN04488121_1011213 | SAMN04488121_104196 | Glutamate synthase (NADH) large subunit. | Allosteric NADP-dependent malic enzyme. | 0.738 |
| SDF23468.1 | SDH29242.1 | SAMN04488121_1011213 | SAMN04488121_110185 | Glutamate synthase (NADH) large subunit. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.883 |
| SDF23468.1 | pckA | SAMN04488121_1011213 | SAMN04488121_10149 | Glutamate synthase (NADH) large subunit. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.931 |
| SDF29566.1 | SDF23468.1 | SAMN04488121_1011402 | SAMN04488121_1011213 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Glutamate synthase (NADH) large subunit. | 0.724 |
| SDF29566.1 | SDF47680.1 | SAMN04488121_1011402 | SAMN04488121_10231 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Hypothetical protein. | 0.866 |
| SDF29566.1 | SDF47755.1 | SAMN04488121_1011402 | SAMN04488121_10233 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.729 |
| SDF29566.1 | SDF55706.1 | SAMN04488121_1011402 | SAMN04488121_102262 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Acyl transferase domain-containing protein. | 0.990 |
| SDF29566.1 | SDF56003.1 | SAMN04488121_1011402 | SAMN04488121_102271 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Phosphopantetheine attachment site. | 0.915 |
| SDF29566.1 | SDG41922.1 | SAMN04488121_1011402 | SAMN04488121_104196 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Allosteric NADP-dependent malic enzyme. | 0.940 |
| SDF29566.1 | SDH29242.1 | SAMN04488121_1011402 | SAMN04488121_110185 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.955 |
| SDF29566.1 | pckA | SAMN04488121_1011402 | SAMN04488121_10149 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.880 |
| SDF47680.1 | SDF29566.1 | SAMN04488121_10231 | SAMN04488121_1011402 | Hypothetical protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.866 |
| SDF47680.1 | SDF47721.1 | SAMN04488121_10231 | SAMN04488121_10232 | Hypothetical protein. | Hypothetical protein. | 0.497 |
| SDF47680.1 | SDF47755.1 | SAMN04488121_10231 | SAMN04488121_10233 | Hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.887 |
| SDF47721.1 | SDF47680.1 | SAMN04488121_10232 | SAMN04488121_10231 | Hypothetical protein. | Hypothetical protein. | 0.497 |
| SDF47721.1 | SDF47755.1 | SAMN04488121_10232 | SAMN04488121_10233 | Hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.773 |
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