Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF66013.1 | SDF67803.1 | SAMN04488121_102579 | SAMN04488121_102633 | Capsular exopolysaccharide family. | Uncharacterised nucleotidyltransferase. | 0.989 |
SDF66013.1 | SDG09193.1 | SAMN04488121_102579 | SAMN04488121_103435 | Capsular exopolysaccharide family. | Capsular exopolysaccharide family. | 0.676 |
SDF66013.1 | SDH02356.1 | SAMN04488121_102579 | SAMN04488121_10883 | Capsular exopolysaccharide family. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.794 |
SDF66013.1 | SDH28029.1 | SAMN04488121_102579 | SAMN04488121_110118 | Capsular exopolysaccharide family. | Capsular exopolysaccharide family. | 0.696 |
SDF66013.1 | SDH28197.1 | SAMN04488121_102579 | SAMN04488121_110126 | Capsular exopolysaccharide family. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.999 |
SDF67663.1 | SDF67695.1 | SAMN04488121_102629 | SAMN04488121_102630 | Asparagine synthase (glutamine-hydrolysing). | Transglutaminase-like superfamily protein. | 0.863 |
SDF67663.1 | SDF67730.1 | SAMN04488121_102629 | SAMN04488121_102631 | Asparagine synthase (glutamine-hydrolysing). | Hypothetical protein. | 0.864 |
SDF67663.1 | SDF67773.1 | SAMN04488121_102629 | SAMN04488121_102632 | Asparagine synthase (glutamine-hydrolysing). | Coenzyme PQQ synthesis protein D (PqqD). | 0.739 |
SDF67663.1 | SDF67803.1 | SAMN04488121_102629 | SAMN04488121_102633 | Asparagine synthase (glutamine-hydrolysing). | Uncharacterised nucleotidyltransferase. | 0.700 |
SDF67695.1 | SDF67663.1 | SAMN04488121_102630 | SAMN04488121_102629 | Transglutaminase-like superfamily protein. | Asparagine synthase (glutamine-hydrolysing). | 0.863 |
SDF67695.1 | SDF67730.1 | SAMN04488121_102630 | SAMN04488121_102631 | Transglutaminase-like superfamily protein. | Hypothetical protein. | 0.950 |
SDF67695.1 | SDF67773.1 | SAMN04488121_102630 | SAMN04488121_102632 | Transglutaminase-like superfamily protein. | Coenzyme PQQ synthesis protein D (PqqD). | 0.903 |
SDF67695.1 | SDF67803.1 | SAMN04488121_102630 | SAMN04488121_102633 | Transglutaminase-like superfamily protein. | Uncharacterised nucleotidyltransferase. | 0.882 |
SDF67730.1 | SDF67663.1 | SAMN04488121_102631 | SAMN04488121_102629 | Hypothetical protein. | Asparagine synthase (glutamine-hydrolysing). | 0.864 |
SDF67730.1 | SDF67695.1 | SAMN04488121_102631 | SAMN04488121_102630 | Hypothetical protein. | Transglutaminase-like superfamily protein. | 0.950 |
SDF67730.1 | SDF67773.1 | SAMN04488121_102631 | SAMN04488121_102632 | Hypothetical protein. | Coenzyme PQQ synthesis protein D (PqqD). | 0.895 |
SDF67730.1 | SDF67803.1 | SAMN04488121_102631 | SAMN04488121_102633 | Hypothetical protein. | Uncharacterised nucleotidyltransferase. | 0.901 |
SDF67730.1 | SDG61523.1 | SAMN04488121_102631 | SAMN04488121_105201 | Hypothetical protein. | Outer membrane protein beta-barrel family protein. | 0.543 |
SDF67773.1 | SDF67663.1 | SAMN04488121_102632 | SAMN04488121_102629 | Coenzyme PQQ synthesis protein D (PqqD). | Asparagine synthase (glutamine-hydrolysing). | 0.739 |
SDF67773.1 | SDF67695.1 | SAMN04488121_102632 | SAMN04488121_102630 | Coenzyme PQQ synthesis protein D (PqqD). | Transglutaminase-like superfamily protein. | 0.903 |
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