STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF68569.1L-rhamnose-H+ transport protein. (350 aa)    
Predicted Functional Partners:
SDF68528.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.833
SDF68448.1
Sugar (pentulose or hexulose) kinase.
 
  
 0.794
SDF68490.1
L-rhamnose isomerase / sugar isomerase.
 
     0.669
SDF66162.1
Substrate-binding protein-like domain-containing protein.
 
     0.602
SDF68276.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.570
SDH64166.1
Hypothetical protein.
 
     0.562
SDH17910.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.531
SDH32889.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.510
SDF68610.1
Hypothetical protein.
  
    0.480
SDF68369.1
L-lactate dehydrogenase complex protein LldF.
       0.463
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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