STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF71484.1MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily. (513 aa)    
Predicted Functional Partners:
SDF17684.1
Membrane fusion protein, multidrug efflux system.
   0.846
SDG20245.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.835
SDH48711.1
Membrane fusion protein, multidrug efflux system.
   0.835
SDG72200.1
Membrane fusion protein, multidrug efflux system.
   0.832
SDF48568.1
Membrane fusion protein, multidrug efflux system.
   0.831
SDH29242.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.575
SDF71453.1
Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.574
SDF71504.1
Methyltransferase domain-containing protein.
       0.535
SDF55706.1
Acyl transferase domain-containing protein.
    
 0.495
SDF71424.1
DNA-binding transcriptional regulator, AcrR family.
       0.446
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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