Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF73163.1 | SDF73194.1 | SAMN04488121_102798 | SAMN04488121_102799 | DNA-binding response regulator, LytR/AlgR family. | Signal transduction histidine kinase. | 0.773 |
SDF73163.1 | SDF73228.1 | SAMN04488121_102798 | SAMN04488121_102800 | DNA-binding response regulator, LytR/AlgR family. | Hypothetical protein. | 0.773 |
SDF73163.1 | SDF73253.1 | SAMN04488121_102798 | SAMN04488121_102801 | DNA-binding response regulator, LytR/AlgR family. | Curved DNA-binding protein. | 0.548 |
SDF73163.1 | SDF73282.1 | SAMN04488121_102798 | SAMN04488121_102802 | DNA-binding response regulator, LytR/AlgR family. | MerR HTH family regulatory protein. | 0.537 |
SDF73163.1 | SDF73310.1 | SAMN04488121_102798 | SAMN04488121_102803 | DNA-binding response regulator, LytR/AlgR family. | Hypothetical protein. | 0.431 |
SDF73194.1 | SDF73163.1 | SAMN04488121_102799 | SAMN04488121_102798 | Signal transduction histidine kinase. | DNA-binding response regulator, LytR/AlgR family. | 0.773 |
SDF73194.1 | SDF73228.1 | SAMN04488121_102799 | SAMN04488121_102800 | Signal transduction histidine kinase. | Hypothetical protein. | 0.773 |
SDF73194.1 | SDF73253.1 | SAMN04488121_102799 | SAMN04488121_102801 | Signal transduction histidine kinase. | Curved DNA-binding protein. | 0.567 |
SDF73194.1 | SDF73282.1 | SAMN04488121_102799 | SAMN04488121_102802 | Signal transduction histidine kinase. | MerR HTH family regulatory protein. | 0.537 |
SDF73194.1 | SDF73310.1 | SAMN04488121_102799 | SAMN04488121_102803 | Signal transduction histidine kinase. | Hypothetical protein. | 0.431 |
SDF73228.1 | SDF73163.1 | SAMN04488121_102800 | SAMN04488121_102798 | Hypothetical protein. | DNA-binding response regulator, LytR/AlgR family. | 0.773 |
SDF73228.1 | SDF73194.1 | SAMN04488121_102800 | SAMN04488121_102799 | Hypothetical protein. | Signal transduction histidine kinase. | 0.773 |
SDF73228.1 | SDF73253.1 | SAMN04488121_102800 | SAMN04488121_102801 | Hypothetical protein. | Curved DNA-binding protein. | 0.548 |
SDF73228.1 | SDF73282.1 | SAMN04488121_102800 | SAMN04488121_102802 | Hypothetical protein. | MerR HTH family regulatory protein. | 0.537 |
SDF73228.1 | SDF73310.1 | SAMN04488121_102800 | SAMN04488121_102803 | Hypothetical protein. | Hypothetical protein. | 0.431 |
SDF73253.1 | SDF73163.1 | SAMN04488121_102801 | SAMN04488121_102798 | Curved DNA-binding protein. | DNA-binding response regulator, LytR/AlgR family. | 0.548 |
SDF73253.1 | SDF73194.1 | SAMN04488121_102801 | SAMN04488121_102799 | Curved DNA-binding protein. | Signal transduction histidine kinase. | 0.567 |
SDF73253.1 | SDF73228.1 | SAMN04488121_102801 | SAMN04488121_102800 | Curved DNA-binding protein. | Hypothetical protein. | 0.548 |
SDF73253.1 | SDF73282.1 | SAMN04488121_102801 | SAMN04488121_102802 | Curved DNA-binding protein. | MerR HTH family regulatory protein. | 0.963 |
SDF73253.1 | SDF73310.1 | SAMN04488121_102801 | SAMN04488121_102803 | Curved DNA-binding protein. | Hypothetical protein. | 0.593 |
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