STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF73369.1Lysophospholipase L1. (220 aa)    
Predicted Functional Partners:
SDF73399.1
2OG-Fe(II) oxygenase superfamily protein.
       0.752
SDH16391.1
Sialate O-acetylesterase.
 
     0.678
SDG77308.1
Sialate O-acetylesterase.
 
     0.677
SDG60385.1
Sialate O-acetylesterase.
 
     0.656
SDG61615.1
Processive endocellulase.
  
 0.604
SDF53041.1
Sialate O-acetylesterase; Belongs to the glycosyl hydrolase 2 family.
 
     0.595
SDE90187.1
Alpha/beta hydrolase family protein.
     0.594
SDH20019.1
Acetyl xylan esterase (AXE1).
 
      0.533
SDG23088.1
Ricin-type beta-trefoil lectin domain-like.
    
 0.524
SDF73433.1
NADH dehydrogenase.
       0.519
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.