STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF73858.1Maltose/moltooligosaccharide transporter. (456 aa)    
Predicted Functional Partners:
SDF73952.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.866
SDF73890.1
Maltose phosphorylase.
 
    0.849
SDF73930.1
Beta-phosphoglucomutase.
 
  
 0.769
SDF73988.1
SusE outer membrane protein.
 
     0.660
SDG60270.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
     0.593
SDF74034.1
Starch-binding associating with outer membrane.
 
     0.588
SDH49044.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
     0.562
SDF18548.1
Alpha-glucosidase.
 
     0.547
SDG95047.1
Alpha-glucosidase.
 
     0.529
SDF74067.1
Iron complex outermembrane recepter protein.
 
     0.499
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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