Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF18709.1 | SDF75121.1 | SAMN04488121_1011065 | SAMN04488121_102858 | TonB protein C-terminal. | Hypothetical protein. | 0.591 |
SDF18709.1 | SDG50459.1 | SAMN04488121_1011065 | SAMN04488121_104494 | TonB protein C-terminal. | TonB family C-terminal domain-containing protein. | 0.727 |
SDF18709.1 | SDG66354.1 | SAMN04488121_1011065 | SAMN04488121_105409 | TonB protein C-terminal. | Outer membrane transport energization protein ExbB. | 0.606 |
SDF18709.1 | SDG81935.1 | SAMN04488121_1011065 | SAMN04488121_106396 | TonB protein C-terminal. | Outer membrane transport energization protein ExbB. | 0.613 |
SDF75094.1 | SDF75121.1 | SAMN04488121_102857 | SAMN04488121_102858 | Hypothetical protein. | Hypothetical protein. | 0.800 |
SDF75121.1 | SDF18709.1 | SAMN04488121_102858 | SAMN04488121_1011065 | Hypothetical protein. | TonB protein C-terminal. | 0.591 |
SDF75121.1 | SDF75094.1 | SAMN04488121_102858 | SAMN04488121_102857 | Hypothetical protein. | Hypothetical protein. | 0.800 |
SDF75121.1 | SDG22911.1 | SAMN04488121_102858 | SAMN04488121_103890 | Hypothetical protein. | TonB protein C-terminal. | 0.589 |
SDF75121.1 | SDG50459.1 | SAMN04488121_102858 | SAMN04488121_104494 | Hypothetical protein. | TonB family C-terminal domain-containing protein. | 0.589 |
SDF75121.1 | SDG65298.1 | SAMN04488121_102858 | SAMN04488121_105368 | Hypothetical protein. | TonB family C-terminal domain-containing protein. | 0.589 |
SDF75121.1 | SDG66354.1 | SAMN04488121_102858 | SAMN04488121_105409 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.812 |
SDF75121.1 | SDG80676.1 | SAMN04488121_102858 | SAMN04488121_106353 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.589 |
SDF75121.1 | SDG81935.1 | SAMN04488121_102858 | SAMN04488121_106396 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.812 |
SDF75121.1 | infB | SAMN04488121_102858 | SAMN04488121_1011136 | Hypothetical protein. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.657 |
SDF75121.1 | ribBA | SAMN04488121_102858 | SAMN04488121_103963 | Hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.618 |
SDG22911.1 | SDF75121.1 | SAMN04488121_103890 | SAMN04488121_102858 | TonB protein C-terminal. | Hypothetical protein. | 0.589 |
SDG22911.1 | SDG50459.1 | SAMN04488121_103890 | SAMN04488121_104494 | TonB protein C-terminal. | TonB family C-terminal domain-containing protein. | 0.545 |
SDG22911.1 | SDG66354.1 | SAMN04488121_103890 | SAMN04488121_105409 | TonB protein C-terminal. | Outer membrane transport energization protein ExbB. | 0.600 |
SDG22911.1 | SDG81935.1 | SAMN04488121_103890 | SAMN04488121_106396 | TonB protein C-terminal. | Outer membrane transport energization protein ExbB. | 0.613 |
SDG50459.1 | SDF18709.1 | SAMN04488121_104494 | SAMN04488121_1011065 | TonB family C-terminal domain-containing protein. | TonB protein C-terminal. | 0.727 |
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