Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF55706.1 | SDF77121.1 | SAMN04488121_102262 | SAMN04488121_102926 | Acyl transferase domain-containing protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.831 |
SDF55706.1 | SDF77166.1 | SAMN04488121_102262 | SAMN04488121_102928 | Acyl transferase domain-containing protein. | Cupin domain-containing protein. | 0.494 |
SDF77096.1 | SDF77121.1 | SAMN04488121_102925 | SAMN04488121_102926 | Protease I. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.482 |
SDF77096.1 | SDF77147.1 | SAMN04488121_102925 | SAMN04488121_102927 | Protease I. | 4-carboxymuconolactone decarboxylase. | 0.564 |
SDF77096.1 | SDF77166.1 | SAMN04488121_102925 | SAMN04488121_102928 | Protease I. | Cupin domain-containing protein. | 0.608 |
SDF77096.1 | SDF77193.1 | SAMN04488121_102925 | SAMN04488121_102929 | Protease I. | 2TM domain-containing protein. | 0.482 |
SDF77121.1 | SDF55706.1 | SAMN04488121_102926 | SAMN04488121_102262 | Pimeloyl-ACP methyl ester carboxylesterase. | Acyl transferase domain-containing protein. | 0.831 |
SDF77121.1 | SDF77096.1 | SAMN04488121_102926 | SAMN04488121_102925 | Pimeloyl-ACP methyl ester carboxylesterase. | Protease I. | 0.482 |
SDF77121.1 | SDF77147.1 | SAMN04488121_102926 | SAMN04488121_102927 | Pimeloyl-ACP methyl ester carboxylesterase. | 4-carboxymuconolactone decarboxylase. | 0.869 |
SDF77121.1 | SDF77166.1 | SAMN04488121_102926 | SAMN04488121_102928 | Pimeloyl-ACP methyl ester carboxylesterase. | Cupin domain-containing protein. | 0.847 |
SDF77121.1 | SDF77193.1 | SAMN04488121_102926 | SAMN04488121_102929 | Pimeloyl-ACP methyl ester carboxylesterase. | 2TM domain-containing protein. | 0.773 |
SDF77121.1 | SDF77251.1 | SAMN04488121_102926 | SAMN04488121_102931 | Pimeloyl-ACP methyl ester carboxylesterase. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.521 |
SDF77147.1 | SDF77096.1 | SAMN04488121_102927 | SAMN04488121_102925 | 4-carboxymuconolactone decarboxylase. | Protease I. | 0.564 |
SDF77147.1 | SDF77121.1 | SAMN04488121_102927 | SAMN04488121_102926 | 4-carboxymuconolactone decarboxylase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.869 |
SDF77147.1 | SDF77166.1 | SAMN04488121_102927 | SAMN04488121_102928 | 4-carboxymuconolactone decarboxylase. | Cupin domain-containing protein. | 0.944 |
SDF77147.1 | SDF77193.1 | SAMN04488121_102927 | SAMN04488121_102929 | 4-carboxymuconolactone decarboxylase. | 2TM domain-containing protein. | 0.773 |
SDF77147.1 | SDF77251.1 | SAMN04488121_102927 | SAMN04488121_102931 | 4-carboxymuconolactone decarboxylase. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.590 |
SDF77147.1 | SDG21539.1 | SAMN04488121_102927 | SAMN04488121_103846 | 4-carboxymuconolactone decarboxylase. | Hypothetical protein. | 0.498 |
SDF77147.1 | SDG91480.1 | SAMN04488121_102927 | SAMN04488121_107204 | 4-carboxymuconolactone decarboxylase. | Quinol monooxygenase YgiN. | 0.515 |
SDF77147.1 | SDH44881.1 | SAMN04488121_102927 | SAMN04488121_112145 | 4-carboxymuconolactone decarboxylase. | Regulatory protein, luxR family. | 0.487 |
page 1 of 3