STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF78225.1Glycosyl hydrolase family 67 N-terminus. (842 aa)    
Predicted Functional Partners:
SDF78593.1
Endo-1,4-beta-xylanase.
     0.855
SDF52976.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
     0.838
SDF53041.1
Sialate O-acetylesterase; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.800
SDH17751.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.779
SDF78196.1
Hypothetical protein.
       0.773
SDH58245.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.731
SDG20058.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.726
SDG60385.1
Sialate O-acetylesterase.
 
 
   0.680
SDH58138.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.678
SDG85800.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
     0.646
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.