Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF52238.1 | SDF99750.1 | SAMN04488121_102166 | SAMN04488121_103116 | L-rhamnose mutarotase. | L-fuconolactonase. | 0.836 |
SDF52238.1 | SDF99778.1 | SAMN04488121_102166 | SAMN04488121_103117 | L-rhamnose mutarotase. | L-fucose dehydrogenase. | 0.765 |
SDF52238.1 | SDF99807.1 | SAMN04488121_102166 | SAMN04488121_103118 | L-rhamnose mutarotase. | MFS transporter, FHS family, L-fucose permease. | 0.584 |
SDF73858.1 | SDF99807.1 | SAMN04488121_102820 | SAMN04488121_103118 | Maltose/moltooligosaccharide transporter. | MFS transporter, FHS family, L-fucose permease. | 0.404 |
SDF99689.1 | SDF99721.1 | SAMN04488121_103114 | SAMN04488121_103115 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-rhamnose mutarotase. | 0.860 |
SDF99689.1 | SDF99750.1 | SAMN04488121_103114 | SAMN04488121_103116 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-fuconolactonase. | 0.775 |
SDF99689.1 | SDF99778.1 | SAMN04488121_103114 | SAMN04488121_103117 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-fucose dehydrogenase. | 0.830 |
SDF99689.1 | SDF99807.1 | SAMN04488121_103114 | SAMN04488121_103118 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | MFS transporter, FHS family, L-fucose permease. | 0.528 |
SDF99721.1 | SDF99689.1 | SAMN04488121_103115 | SAMN04488121_103114 | L-rhamnose mutarotase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.860 |
SDF99721.1 | SDF99750.1 | SAMN04488121_103115 | SAMN04488121_103116 | L-rhamnose mutarotase. | L-fuconolactonase. | 0.929 |
SDF99721.1 | SDF99778.1 | SAMN04488121_103115 | SAMN04488121_103117 | L-rhamnose mutarotase. | L-fucose dehydrogenase. | 0.880 |
SDF99721.1 | SDF99807.1 | SAMN04488121_103115 | SAMN04488121_103118 | L-rhamnose mutarotase. | MFS transporter, FHS family, L-fucose permease. | 0.735 |
SDF99750.1 | SDF52238.1 | SAMN04488121_103116 | SAMN04488121_102166 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.836 |
SDF99750.1 | SDF99689.1 | SAMN04488121_103116 | SAMN04488121_103114 | L-fuconolactonase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.775 |
SDF99750.1 | SDF99721.1 | SAMN04488121_103116 | SAMN04488121_103115 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.929 |
SDF99750.1 | SDF99778.1 | SAMN04488121_103116 | SAMN04488121_103117 | L-fuconolactonase. | L-fucose dehydrogenase. | 0.986 |
SDF99750.1 | SDF99807.1 | SAMN04488121_103116 | SAMN04488121_103118 | L-fuconolactonase. | MFS transporter, FHS family, L-fucose permease. | 0.762 |
SDF99778.1 | SDF52238.1 | SAMN04488121_103117 | SAMN04488121_102166 | L-fucose dehydrogenase. | L-rhamnose mutarotase. | 0.765 |
SDF99778.1 | SDF99689.1 | SAMN04488121_103117 | SAMN04488121_103114 | L-fucose dehydrogenase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.830 |
SDF99778.1 | SDF99721.1 | SAMN04488121_103117 | SAMN04488121_103115 | L-fucose dehydrogenase. | L-rhamnose mutarotase. | 0.880 |
page 1 of 2