STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF96668.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
SDF96653.1
Thiol-disulfide isomerase or thioredoxin.
 
     0.917
SDF96631.1
Starch-binding associating with outer membrane.
 
     0.848
SDF16749.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
  
 0.677
SDF96606.1
Iron complex outermembrane recepter protein.
 
     0.674
SDF21957.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.652
SDF80687.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.594
SDF64258.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.578
SDF10629.1
Sulfane dehydrogenase subunit SoxC.
   
  0.569
SDG11072.1
Oxidoreductase molybdopterin binding domain-containing protein.
   
  0.569
SDE88800.1
Hypothetical protein.
  
     0.502
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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