STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG03676.1Xanthine dehydrogenase YagT iron-sulfur-binding subunit. (208 aa)    
Predicted Functional Partners:
SDG03711.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 0.999
SDG03739.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.999
SDG58905.1
Xanthine dehydrogenase large subunit.
 
  
  0.984
SDG27688.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.980
SDF47330.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.979
SDH07616.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.978
SDH33245.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.978
SDF47215.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.890
SDF47254.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
 
 0.874
SDG58873.1
Xanthine dehydrogenase accessory factor.
 
 
 0.872
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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