STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG14184.1Outer membrane receptor proteins, mostly Fe transport. (806 aa)    
Predicted Functional Partners:
SDG14212.1
Hypothetical protein.
       0.565
SDG14445.1
HlyD family secretion protein.
 
     0.554
SDF14403.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.535
SDF14455.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.514
SDG65298.1
TonB family C-terminal domain-containing protein.
  
   0.503
SDG13190.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.482
SDH65582.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
 
0.474
SDG91573.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
 
0.457
SDG50396.1
Protein of unknown function.
  
     0.445
SDG14134.1
Hypothetical protein.
       0.435
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.