STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG15825.1Maltooligosyl trehalose synthase. (878 aa)    
Predicted Functional Partners:
SDG15852.1
Maltooligosyl trehalose hydrolase.
 
 0.999
SDG15904.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
 
 0.996
SDG58958.1
Alpha amylase, catalytic domain.
 
 
 0.936
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.896
SDG03927.1
Alpha-amylase.
  
 
 0.847
SDG15876.1
Oligo-1,6-glucosidase.
 
 
 0.801
SDH21618.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.735
SDH55885.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
 
  
 0.665
SDH55920.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.647
SDF64705.1
Glucose-1-phosphate adenylyltransferase.
    
 0.614
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.