STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG16026.1Por secretion system C-terminal sorting domain-containing protein. (1124 aa)    
Predicted Functional Partners:
SDG00368.1
Endoglucanase.
  
  
  0.781
SDF47638.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 
0.771
SDG18317.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
  
 0.766
SDH13625.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.732
SDG61615.1
Processive endocellulase.
 
  
  0.706
SDF10130.1
Beta-glucosidase.
   
 
 0.699
SDH63913.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
   
 
 0.699
SDG57535.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
     
 0.697
SDG60245.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.656
SDG04231.1
Chitinase.
 
0.576
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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