Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE92151.1 | SDF22933.1 | SAMN04488121_101179 | SAMN04488121_1011196 | ABC-2 family transporter protein. | Arsenate reductase; Belongs to the ArsC family. | 0.503 |
SDE92151.1 | SDF98250.1 | SAMN04488121_101179 | SAMN04488121_10370 | ABC-2 family transporter protein. | Hypothetical protein. | 0.483 |
SDE98107.1 | SDF15091.1 | SAMN04488121_101409 | SAMN04488121_101948 | Cell division protein ZapA. | Gliding motility associated protien GldN. | 0.639 |
SDE98107.1 | SDF98250.1 | SAMN04488121_101409 | SAMN04488121_10370 | Cell division protein ZapA. | Hypothetical protein. | 0.445 |
SDE98107.1 | SDG63106.1 | SAMN04488121_101409 | SAMN04488121_105272 | Cell division protein ZapA. | Hypothetical protein. | 0.480 |
SDE98107.1 | SDG63681.1 | SAMN04488121_101409 | SAMN04488121_105299 | Cell division protein ZapA. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.618 |
SDF15091.1 | SDE98107.1 | SAMN04488121_101948 | SAMN04488121_101409 | Gliding motility associated protien GldN. | Cell division protein ZapA. | 0.639 |
SDF15091.1 | SDF98250.1 | SAMN04488121_101948 | SAMN04488121_10370 | Gliding motility associated protien GldN. | Hypothetical protein. | 0.507 |
SDF15091.1 | SDG63106.1 | SAMN04488121_101948 | SAMN04488121_105272 | Gliding motility associated protien GldN. | Hypothetical protein. | 0.669 |
SDF22933.1 | SDE92151.1 | SAMN04488121_1011196 | SAMN04488121_101179 | Arsenate reductase; Belongs to the ArsC family. | ABC-2 family transporter protein. | 0.503 |
SDF22933.1 | SDF98250.1 | SAMN04488121_1011196 | SAMN04488121_10370 | Arsenate reductase; Belongs to the ArsC family. | Hypothetical protein. | 0.444 |
SDF98250.1 | SDE92151.1 | SAMN04488121_10370 | SAMN04488121_101179 | Hypothetical protein. | ABC-2 family transporter protein. | 0.483 |
SDF98250.1 | SDE98107.1 | SAMN04488121_10370 | SAMN04488121_101409 | Hypothetical protein. | Cell division protein ZapA. | 0.445 |
SDF98250.1 | SDF15091.1 | SAMN04488121_10370 | SAMN04488121_101948 | Hypothetical protein. | Gliding motility associated protien GldN. | 0.507 |
SDF98250.1 | SDF22933.1 | SAMN04488121_10370 | SAMN04488121_1011196 | Hypothetical protein. | Arsenate reductase; Belongs to the ArsC family. | 0.444 |
SDF98250.1 | SDG42567.1 | SAMN04488121_10370 | SAMN04488121_104223 | Hypothetical protein. | Peptidase family C25. | 0.740 |
SDF98250.1 | SDG63106.1 | SAMN04488121_10370 | SAMN04488121_105272 | Hypothetical protein. | Hypothetical protein. | 0.464 |
SDF98250.1 | SDG63681.1 | SAMN04488121_10370 | SAMN04488121_105299 | Hypothetical protein. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.635 |
SDF98250.1 | SDG73185.1 | SAMN04488121_10370 | SAMN04488121_10669 | Hypothetical protein. | Outer membrane protein TolC. | 0.439 |
SDF98250.1 | gcvP | SAMN04488121_10370 | SAMN04488121_10369 | Hypothetical protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.508 |
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