STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG17230.1Hypothetical protein. (846 aa)    
Predicted Functional Partners:
SDG17191.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
 
     0.949
SDF57915.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.768
SDG10487.1
AsmA family protein.
  
     0.729
SDH66573.1
HEPN domain-containing protein.
  
     0.727
SDF68181.1
Hypothetical protein.
  
 
   0.724
SDG16256.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.711
SDG91995.1
Right handed beta helix region.
  
     0.697
SDF79729.1
OmpA family protein.
  
     0.694
SDH04873.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.694
SDG04541.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.690
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.