Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF02565.1 | SDF03674.1 | SAMN04488121_101561 | SAMN04488121_101594 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | Pectate lyase. | 0.736 |
SDF02565.1 | SDF49417.1 | SAMN04488121_101561 | SAMN04488121_10282 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | WGR domain-containing protein, predicted DNA-binding domain in MolR. | 0.588 |
SDF02565.1 | SDF51281.1 | SAMN04488121_101561 | SAMN04488121_102139 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | Pectate lyase. | 0.912 |
SDF02565.1 | SDG18779.1 | SAMN04488121_101561 | SAMN04488121_103761 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.738 |
SDF02565.1 | SDG91995.1 | SAMN04488121_101561 | SAMN04488121_107221 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | Right handed beta helix region. | 0.428 |
SDF02565.1 | SDH66442.1 | SAMN04488121_101561 | SAMN04488121_11740 | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | Pectate lyase. | 0.891 |
SDF03674.1 | SDF02565.1 | SAMN04488121_101594 | SAMN04488121_101561 | Pectate lyase. | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | 0.736 |
SDF03674.1 | SDG18779.1 | SAMN04488121_101594 | SAMN04488121_103761 | Pectate lyase. | Por secretion system C-terminal sorting domain-containing protein. | 0.660 |
SDF03674.1 | SDG91995.1 | SAMN04488121_101594 | SAMN04488121_107221 | Pectate lyase. | Right handed beta helix region. | 0.744 |
SDF03674.1 | SDH66442.1 | SAMN04488121_101594 | SAMN04488121_11740 | Pectate lyase. | Pectate lyase. | 0.752 |
SDF49417.1 | SDF02565.1 | SAMN04488121_10282 | SAMN04488121_101561 | WGR domain-containing protein, predicted DNA-binding domain in MolR. | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | 0.588 |
SDF49417.1 | SDF51281.1 | SAMN04488121_10282 | SAMN04488121_102139 | WGR domain-containing protein, predicted DNA-binding domain in MolR. | Pectate lyase. | 0.515 |
SDF49417.1 | SDG18779.1 | SAMN04488121_10282 | SAMN04488121_103761 | WGR domain-containing protein, predicted DNA-binding domain in MolR. | Por secretion system C-terminal sorting domain-containing protein. | 0.578 |
SDF49417.1 | SDG91995.1 | SAMN04488121_10282 | SAMN04488121_107221 | WGR domain-containing protein, predicted DNA-binding domain in MolR. | Right handed beta helix region. | 0.633 |
SDF51281.1 | SDF02565.1 | SAMN04488121_102139 | SAMN04488121_101561 | Pectate lyase. | Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein. | 0.912 |
SDF51281.1 | SDF49417.1 | SAMN04488121_102139 | SAMN04488121_10282 | Pectate lyase. | WGR domain-containing protein, predicted DNA-binding domain in MolR. | 0.515 |
SDF51281.1 | SDG18779.1 | SAMN04488121_102139 | SAMN04488121_103761 | Pectate lyase. | Por secretion system C-terminal sorting domain-containing protein. | 0.690 |
SDF51281.1 | SDG91995.1 | SAMN04488121_102139 | SAMN04488121_107221 | Pectate lyase. | Right handed beta helix region. | 0.755 |
SDF51281.1 | SDH66442.1 | SAMN04488121_102139 | SAMN04488121_11740 | Pectate lyase. | Pectate lyase. | 0.759 |
SDG04231.1 | SDG18779.1 | SAMN04488121_103263 | SAMN04488121_103761 | Chitinase. | Por secretion system C-terminal sorting domain-containing protein. | 0.561 |
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