STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG19556.1Hypothetical protein. (568 aa)    
Predicted Functional Partners:
SDG23088.1
Ricin-type beta-trefoil lectin domain-like.
    
 0.671
SDG19587.1
Protein of unknown function.
       0.472
SDH63073.1
Beta-glucosidase.
    
   0.429
SDH17116.1
F5/8 type C domain-containing protein.
   
 
  0.413
SDF67502.1
Microcystin-dependent protein.
    
   0.408
SDF67532.1
Microcystin-dependent protein.
    
   0.408
SDF67561.1
Microcystin-dependent protein.
    
   0.408
SDF75420.1
Phage Tail Collar Domain.
    
   0.408
SDG62631.1
Hypothetical protein.
    
   0.408
SDH51496.1
Microcystin-dependent protein.
    
   0.408
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.