Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF55706.1 | SDF55971.1 | SAMN04488121_102262 | SAMN04488121_102270 | Acyl transferase domain-containing protein. | HxxPF-repeated domain-containing protein. | 0.999 |
SDF55706.1 | SDG10757.1 | SAMN04488121_102262 | SAMN04488121_103487 | Acyl transferase domain-containing protein. | 8-amino-7-oxononanoate synthase. | 0.960 |
SDF55706.1 | SDG11258.1 | SAMN04488121_102262 | SAMN04488121_103505 | Acyl transferase domain-containing protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.899 |
SDF55706.1 | SDG25164.1 | SAMN04488121_102262 | SAMN04488121_103967 | Acyl transferase domain-containing protein. | 7-keto-8-aminopelargonate synthetase. | 0.924 |
SDF55706.1 | SDG26523.1 | SAMN04488121_102262 | SAMN04488121_1031014 | Acyl transferase domain-containing protein. | 8-amino-7-oxononanoate synthase. | 0.945 |
SDF55706.1 | SDH29242.1 | SAMN04488121_102262 | SAMN04488121_110185 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55706.1 | bioD | SAMN04488121_102262 | SAMN04488121_10854 | Acyl transferase domain-containing protein. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.540 |
SDF55706.1 | gcvP | SAMN04488121_102262 | SAMN04488121_10369 | Acyl transferase domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.586 |
SDF55971.1 | SDF55706.1 | SAMN04488121_102270 | SAMN04488121_102262 | HxxPF-repeated domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SDF55971.1 | SDG10757.1 | SAMN04488121_102270 | SAMN04488121_103487 | HxxPF-repeated domain-containing protein. | 8-amino-7-oxononanoate synthase. | 0.907 |
SDF55971.1 | SDG11258.1 | SAMN04488121_102270 | SAMN04488121_103505 | HxxPF-repeated domain-containing protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.768 |
SDF55971.1 | SDG25164.1 | SAMN04488121_102270 | SAMN04488121_103967 | HxxPF-repeated domain-containing protein. | 7-keto-8-aminopelargonate synthetase. | 0.891 |
SDF55971.1 | SDG26523.1 | SAMN04488121_102270 | SAMN04488121_1031014 | HxxPF-repeated domain-containing protein. | 8-amino-7-oxononanoate synthase. | 0.892 |
SDF55971.1 | SDH29242.1 | SAMN04488121_102270 | SAMN04488121_110185 | HxxPF-repeated domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55971.1 | gcvP | SAMN04488121_102270 | SAMN04488121_10369 | HxxPF-repeated domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.581 |
SDG10757.1 | SDF55706.1 | SAMN04488121_103487 | SAMN04488121_102262 | 8-amino-7-oxononanoate synthase. | Acyl transferase domain-containing protein. | 0.960 |
SDG10757.1 | SDF55971.1 | SAMN04488121_103487 | SAMN04488121_102270 | 8-amino-7-oxononanoate synthase. | HxxPF-repeated domain-containing protein. | 0.907 |
SDG10757.1 | SDG11258.1 | SAMN04488121_103487 | SAMN04488121_103505 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
SDG10757.1 | SDG25164.1 | SAMN04488121_103487 | SAMN04488121_103967 | 8-amino-7-oxononanoate synthase. | 7-keto-8-aminopelargonate synthetase. | 0.781 |
SDG10757.1 | SDG26523.1 | SAMN04488121_103487 | SAMN04488121_1031014 | 8-amino-7-oxononanoate synthase. | 8-amino-7-oxononanoate synthase. | 0.787 |
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