STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG42094.1Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (211 aa)    
Predicted Functional Partners:
SDG10241.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.973
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
      0.847
SDF04217.1
Hypothetical protein.
  
 0.774
SDF08641.1
Peroxiredoxin.
  
 0.774
SDF13918.1
Thioredoxin.
  
 0.774
SDF14174.1
Peroxiredoxin.
  
 0.774
SDF83909.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.774
SDF46622.1
Peroxiredoxin.
  
 0.774
SDF59115.1
Thioredoxin.
  
 0.774
SDF61618.1
Thioredoxin-like.
  
 0.774
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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