STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG59912.1CubicO group peptidase, beta-lactamase class C family. (540 aa)    
Predicted Functional Partners:
SDH21341.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.771
SDH41532.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.770
SDH41323.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.762
SDG62237.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.743
SDE93753.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.718
SDG59938.1
ABC-2 type transport system permease protein.
       0.578
SDG59970.1
ABC-2 type transport system ATP-binding protein.
       0.577
SDG60002.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
       0.573
SDF57656.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.572
SDH45595.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.434
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.