STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG71971.1Hypothetical protein. (233 aa)    
Predicted Functional Partners:
SDG12857.1
NADH-quinone oxidoreductase subunit C/D; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
    
 
 0.990
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
    
 
 0.947
SDG71993.1
Starch-binding associating with outer membrane.
       0.768
SDG72019.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.737
SDG71951.1
Delta-60 repeat domain-containing protein.
       0.732
SDG71927.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
    0.713
SDG72043.1
Protein of unknown function.
       0.686
SDG72113.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.646
SDG72064.1
Fasciclin domain-containing protein.
       0.639
SDG71898.1
Hypothetical protein.
       0.613
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.