Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF14209.1 | SDG23485.1 | SAMN04488121_101918 | SAMN04488121_103909 | SusD family protein. | Starch-binding associating with outer membrane. | 0.414 |
SDF14209.1 | SDG77145.1 | SAMN04488121_101918 | SAMN04488121_106226 | SusD family protein. | Starch-binding associating with outer membrane. | 0.647 |
SDF14209.1 | SDG77168.1 | SAMN04488121_101918 | SAMN04488121_106227 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.758 |
SDF50665.1 | SDG77168.1 | SAMN04488121_102122 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.764 |
SDG06461.1 | SDG77168.1 | SAMN04488121_103345 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.773 |
SDG18875.1 | SDG77168.1 | SAMN04488121_103764 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.764 |
SDG23485.1 | SDF14209.1 | SAMN04488121_103909 | SAMN04488121_101918 | Starch-binding associating with outer membrane. | SusD family protein. | 0.414 |
SDG23485.1 | SDG77168.1 | SAMN04488121_103909 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.750 |
SDG57966.1 | SDG77168.1 | SAMN04488121_10580 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.764 |
SDG77115.1 | SDG77145.1 | SAMN04488121_106225 | SAMN04488121_106226 | SusE outer membrane protein. | Starch-binding associating with outer membrane. | 0.922 |
SDG77115.1 | SDG77168.1 | SAMN04488121_106225 | SAMN04488121_106227 | SusE outer membrane protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.863 |
SDG77145.1 | SDF14209.1 | SAMN04488121_106226 | SAMN04488121_101918 | Starch-binding associating with outer membrane. | SusD family protein. | 0.647 |
SDG77145.1 | SDG77115.1 | SAMN04488121_106226 | SAMN04488121_106225 | Starch-binding associating with outer membrane. | SusE outer membrane protein. | 0.922 |
SDG77145.1 | SDG77168.1 | SAMN04488121_106226 | SAMN04488121_106227 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.942 |
SDG77168.1 | SDF14209.1 | SAMN04488121_106227 | SAMN04488121_101918 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.758 |
SDG77168.1 | SDF50665.1 | SAMN04488121_106227 | SAMN04488121_102122 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.764 |
SDG77168.1 | SDG06461.1 | SAMN04488121_106227 | SAMN04488121_103345 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.773 |
SDG77168.1 | SDG18875.1 | SAMN04488121_106227 | SAMN04488121_103764 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.764 |
SDG77168.1 | SDG23485.1 | SAMN04488121_106227 | SAMN04488121_103909 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.750 |
SDG77168.1 | SDG57966.1 | SAMN04488121_106227 | SAMN04488121_10580 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.764 |
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