Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF26002.1 | SDG80986.1 | SAMN04488121_1011293 | SAMN04488121_106364 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | N-acetylmuramoyl-L-alanine amidase. | 0.441 |
SDG80952.1 | SDG80986.1 | SAMN04488121_106363 | SAMN04488121_106364 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.732 |
SDG80952.1 | SDG81013.1 | SAMN04488121_106363 | SAMN04488121_106365 | Hypothetical protein. | Alpha-1,2-mannosidase, putative. | 0.491 |
SDG80986.1 | SDF26002.1 | SAMN04488121_106364 | SAMN04488121_1011293 | N-acetylmuramoyl-L-alanine amidase. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.441 |
SDG80986.1 | SDG80952.1 | SAMN04488121_106364 | SAMN04488121_106363 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.732 |
SDG80986.1 | SDG81013.1 | SAMN04488121_106364 | SAMN04488121_106365 | N-acetylmuramoyl-L-alanine amidase. | Alpha-1,2-mannosidase, putative. | 0.516 |
SDG81013.1 | SDG80952.1 | SAMN04488121_106365 | SAMN04488121_106363 | Alpha-1,2-mannosidase, putative. | Hypothetical protein. | 0.491 |
SDG81013.1 | SDG80986.1 | SAMN04488121_106365 | SAMN04488121_106364 | Alpha-1,2-mannosidase, putative. | N-acetylmuramoyl-L-alanine amidase. | 0.516 |