Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG61615.1 | SDG91217.1 | SAMN04488121_105205 | SAMN04488121_107195 | Processive endocellulase. | Hypothetical protein. | 0.454 |
SDG61615.1 | SDH58245.1 | SAMN04488121_105205 | SAMN04488121_11522 | Processive endocellulase. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.800 |
SDG91217.1 | SDG61615.1 | SAMN04488121_107195 | SAMN04488121_105205 | Hypothetical protein. | Processive endocellulase. | 0.454 |
SDG91217.1 | SDG91244.1 | SAMN04488121_107195 | SAMN04488121_107196 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.451 |
SDG91217.1 | SDG92402.1 | SAMN04488121_107195 | SAMN04488121_107235 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.455 |
SDG91217.1 | SDH13277.1 | SAMN04488121_107195 | SAMN04488121_10932 | Hypothetical protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.420 |
SDG91217.1 | SDH58245.1 | SAMN04488121_107195 | SAMN04488121_11522 | Hypothetical protein. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.550 |
SDG91244.1 | SDG91217.1 | SAMN04488121_107196 | SAMN04488121_107195 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.451 |
SDG92402.1 | SDG91217.1 | SAMN04488121_107235 | SAMN04488121_107195 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.455 |
SDG92402.1 | SDH13277.1 | SAMN04488121_107235 | SAMN04488121_10932 | Por secretion system C-terminal sorting domain-containing protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.448 |
SDH13277.1 | SDG91217.1 | SAMN04488121_10932 | SAMN04488121_107195 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Hypothetical protein. | 0.420 |
SDH13277.1 | SDG92402.1 | SAMN04488121_10932 | SAMN04488121_107235 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Por secretion system C-terminal sorting domain-containing protein. | 0.448 |
SDH58245.1 | SDG61615.1 | SAMN04488121_11522 | SAMN04488121_105205 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Processive endocellulase. | 0.800 |
SDH58245.1 | SDG91217.1 | SAMN04488121_11522 | SAMN04488121_107195 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Hypothetical protein. | 0.550 |