STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG86193.1Gliding motility-associated C-terminal domain-containing protein. (1623 aa)    
Predicted Functional Partners:
SDE87432.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.768
SDG42251.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.747
SDF13123.1
Hypothetical protein.
  
     0.745
SDG46562.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.732
SDG93483.1
Hypothetical protein.
  
     0.728
SDF98739.1
Hypothetical protein.
  
     0.711
SDE87820.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.696
SDG87839.1
Hypothetical protein.
  
     0.692
SDG08068.1
Hypothetical protein.
  
     0.676
SDE93167.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.670
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.