STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG87715.1Putative ABC transport system permease protein. (417 aa)    
Predicted Functional Partners:
SDE87113.1
Putative ABC transport system ATP-binding protein.
  0.988
SDF68931.1
Putative ABC transport system ATP-binding protein.
  0.988
SDG49534.1
ABC-type lipoprotein export system, ATPase component.
  0.984
SDG49666.1
Putative ABC transport system ATP-binding protein.
 
  0.982
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.960
SDG65349.1
Cell division transport system ATP-binding protein.
 
      0.889
SDF82458.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
      0.881
SDG89351.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
      0.866
SDF68974.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.858
SDG49472.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.819
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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