STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH05518.1Arabinan endo-1,5-alpha-L-arabinosidase. (329 aa)    
Predicted Functional Partners:
SDH05491.1
Alpha-L-arabinofuranosidase.
  
  0.869
SDH35918.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
    
0.772
SDF69144.1
Alpha-L-arabinofuranosidase.
  
  0.721
SDH05462.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.700
SDG18810.1
Carbohydrate binding domain-containing protein.
  
  0.697
SDH28725.1
alpha-N-arabinofuranosidase.
 
  
  0.667
SDH34339.1
alpha-N-arabinofuranosidase.
 
  
  0.629
SDH05430.1
Starch-binding associating with outer membrane.
 
     0.606
SDH01428.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
 
      0.588
SDG37682.1
Hypothetical protein.
  
     0.586
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.