STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH05791.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
SDH05759.1
Protein of unknown function.
       0.737
SDH05819.1
Hypothetical protein.
       0.718
SDH05847.1
Conserved hypothetical phage tail region protein.
       0.567
SDH05882.1
Conserved hypothetical phage tail region protein.
       0.567
SDH05911.1
Hypothetical protein.
       0.567
SDH05945.1
Hypothetical protein.
       0.567
SDH05979.1
Rhs element Vgr protein.
       0.567
SDH06011.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
       0.549
SDH06035.1
Hypothetical protein.
       0.535
SDH06073.1
Hypothetical protein.
       0.464
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.